Test v3.0 - Test two different functions for competition (basal area)
Will Vieira
Last updated on 22 October, 2020
Compare the convergence of the model using two different functions for the competition effect using Basal area:
sim1: Linear function with intercept fixed at 1 and slope varying [-0.0001, 0.015]
sim2: Modified half-normal function with sigma varying [0, 1]
Rhat
Divergent transitions
Density plot of each parameter by species id
Data distribution
Size, temperature, precipitation and competition effect
Predictions
Out-of-bag predictions
To compare the model efficiency, we plot the 1:1, and the regression line from lm(pred_growth ~ real_growth) for both Bayesian and random forest methods as reference.